Pix please...
one line will be coming from your prefilt ers (1st will be a particulate filter, then either a
carbon block or carbon-impreganted particulate filter), that goes to where your RO membrne will be, then there will be the presure gauge on the premembrane side as a take-off, thn there will possibly be flush falve to flush the membrne af ter each use. after the "in" source is connected, there should be a waste line and filtrate line from the membrane cartridge, the fltrate line goes to the RO cartridge(s), thn to a float valve if you hve the water going to an ATO setup. See the Spectrapure site for some general setup diagrams for their product, it should help you determine what to do, as MOST of these units are pretty much the same.
I believe it is
www.spectrapure.com
hth