I have used different thicknesses and prefer 3/8". even 3/8" will warp some, but with one rock on it np. Both syliconing and not syliconing work. You do need ot get that first rock down to hold it down, but once you do have some weight its not going anywhere. I prefer to not sylicone it.
The disadvantage is, if you lift up the structure it will come up enough for snails to get sucked under and you will have to finish cleaning your tank. 6 of one half dozzen of the other.
I just noticed you have a sheet of 1/4". I would just use that. The main thing its for is spreading any impact. I do agree black looks better though
